GENOTYPE × PHENOTYPE × TIME

Phenotype is strongest when genotype and time stay attached.

The 61-person corpus connects five molecular-context categories plus one unresolved roster group, fifteen clinical lanes, age and sex context, and within-person change. Missing information remains missing; genotype is an analytic frame, not a prediction of outcome.

SCIENTIFIC SUMMARY

From ASH1L dosage to cell state, tissue function, and clinical trajectory.

The evidence is strongest at gene level, increasingly specific in experimental cell and tissue systems, and still incomplete for many human multisystem features.

ESTABLISHED

Dosage-sensitive chromatin disorder

Heterozygous ASH1L loss of function is an established cause of autosomal-dominant neurodevelopmental disorder. Developmental, language, intellectual, behavioral, motor, sleep, and seizure phenotypes are supported across human series. Missense, in-frame, splice, CNV, and complex findings still require finding-specific interpretation.

COHORT OBSERVATION

Neurodevelopmental core, broader system burden

The records extend into oral-motor and dental function, GI and fuel state, ENT and airway, movement and pain, immune and barrier findings, connective and skeletal features, cardiac/autonomic physiology, puberty, medication and anesthesia response, and adult support needs. Uneven assessment prevents prevalence claims.

LONGITUDINAL SIGNAL

Regression is not one event type

Eight evidence-mapped histories span seven forms of regression, loss of access, or severe deterioration. The cohort also contains continued acquisition, explicit no-regression histories, and complete recovery after severe illness. Each trajectory requires its own chronology and differential.

TESTABLE HYPOTHESIS

Cell-state transition, stabilization, and return to baseline

Direct experiments show that ASH1L effects depend on cell identity and state. The human records motivate—but do not prove—a cross-scale hypothesis about persistent or incompletely resolving clinical states after physiological load. “Failure to terminate” is therefore a defined experimental question, not a cohort diagnosis.

THE ANALYTIC FRAME

Genotype, phenotype, and time are one connected analysis.

Every person remains linked to molecular class, exact allele when confirmed, sex, current age, relatedness, co-findings, source depth, and chronology. That structure makes recurrence, co-occurrence, and data gaps visible while preventing a thin record from becoming a false negative or a molecular class from becoming a prognosis.

0132

LoF / truncating

15 female · 17 male

31 have a sequence-positioned protein consequence; one remains outside protein-position math.
0218

Missense

6 female · 12 male

Allele-specific interpretation is required; missense is not assumed equivalent to haploinsufficiency.
035

CNV / deletion

2 female · 3 male

Retained as a multigene molecular context, separate from sequence-only comparisons.
043

Complex / mixed

1 female · 2 male

Multiple molecular or inheritance factors remain visible rather than being forced into a cleaner class.
052

Splice, protein undefined

0 female · 2 male

The protein consequence is not sufficiently resolved for position-based analysis.
061

Pending / unresolved

0 female · 1 male

Visible in the full roster but excluded from class-specific inference.

RECURRENCE & MULTI-VARIANT STRUCTURE

2unrelated LoF pairs2dual-variant individuals

Independent pairs, a familial cluster, and within-person dual findings answer different questions.

The map separates an opposite-sex same-stop frameshift pair, a same-sex truncating pair, an internal-to-physician LoF match, five related missense cases, one dual-missense individual, and one truncating-plus-missense individual.

Review the molecular structures →

PUBLIC POSITIONAL RECURRENCE · RESIDUE 1222

2public frameshift consequences4public provenance rows

Two public frameshift consequences meet at one residue.

Duplicated public source rows remain provenance rather than independent people. Connected-cohort and clinician-shared records stay in broad protein segments and are not asserted here as exact residue-level matches.

Examine residue 1222 →

5familial-cluster rows

17co-finding control rows

Overlays—not extra people or variant classes.

Relatedness changes independence. Co-findings can change interpretation. Both stay attached to the molecular and phenotype record without being added to the 61-person total.

01Molecular architecture

Exact allele, class, relatedness, and co-findings define the valid descriptive set.

02Fifteen-lane phenotype

Positive, negative, unresolved, and unreported states remain distinct.

03Natural history

Baseline, change, measurement, intervention, and recovery define the trajectory.

Follow the molecule → cell → tissue evidence chain →

WHERE COVERAGE PARTITIONS ARE COMPLETE

Descriptive subgroup partitions are shown only where every source state closes.

Seizure/EEG and cardiac/autonomic pages show mutually exclusive sex-by-molecular-class source-coverage partitions. They describe what is mapped, unresolved, negative, or unreported—not prevalence or a genotype effect. Sleep examples carry molecular class and chronology. Other lanes retain molecular context in the analytic record, but this public site does not invent genotype frequencies from incomplete reporting.

SEVEN CLINICAL CHAPTERS

Each chapter is distinct. The connections remain visible.

The grouping makes the material readable without pretending the systems are isolated. Sleep can alter seizures and access; oral mechanics connect to nutrition and airway; immune, barrier, autonomic, and medication effects can change several lanes at once.

LONGITUDINAL PHENOTYPE

Baseline → context → change → measurement → intervention → recovery.

The same chronology standard is applied to development, seizures, sleep, movement, oral–GI function, immune and barrier events, cardiac/autonomic physiology, medication, procedures, and adult function.

Follow the age-ordered trajectories

WHAT IS VISIBLE ACROSS AGES

The current cohort reaches from infancy through adulthood.

This is current-age composition—not age of onset or a cross-sectional prevalence comparison. The complete age-by-system source map and the deep within-person stories live together on the longitudinal page.

1infant <1

8toddler 1–3

20child 4–11

13adolescent 12–17

17adult 18+

1passed / deceased

1age not reported

01

Early records are already multisystem.

Feeding, tone, development, sleep, GI function, ENT/airway, growth, and neurologic events can all precede a settled diagnostic narrative.

02

Adolescent blanks are not recovery.

Oral, GI, immune, bone, hormonal, and autonomic documentation remains uneven. Missing follow-up must stay visible as missing.

03

Adult phenotype does not disappear.

Communication, memory access, epilepsy, sleep, movement, GI, immune, cardiac/autonomic, bone, mental-health, and support needs remain part of adult natural history.

FIFTEEN-LANE COVERAGE

Every lane closes at 61 people.

Each person is assigned once: positive only; positive plus an explicit negative or unresolved candidate; negative only; unresolved with no positive; or unreported. Formal-record status is evidence strength within those groups—not another person count.

LanePositive onlyPositive + negative / unresolvedNegative onlyUnresolved, no positiveUnreportedTotal
L01Birth & early feeding212003861
L02Genetics & molecular status59000261
L03Development & language401011961
L04Seizures, EEG & spells168652661
L05Sleep, state & fatigue295002761
L06Oral function, dentition & chewing241103561
L07GI, bowel & fuel state266112761
L08ENT, hearing & airway185303561
L09Motor, tone, gait & vision318002261
L10Behavior & sensory regulation351002561
L11Immune, skin & mucosa187003661
L12Cardiac, autonomic, urinary & temperature146123861
L13Growth, endocrine, puberty & bone253003361
L14Medication & anesthesia201004061
L15Function, school & adult life351002561

State definitions: “Positive + negative / unresolved” means that the same person has positive content plus either an explicit-negative subfeature or an unresolved candidate within that broad lane. “Unresolved, no positive” includes a candidate with or without an explicit-negative subfeature, but no positive content. These are person-level display states; they are not severity grades.

Formal evidence is nested within the mapped group, not added as another person count: L01 2 · L02 21 · L03 9 · L04 13 · L05 7 · L06 4 · L07 3 · L08 5 · L09 7 · L10 4 · L11 6 · L12 6 · L13 7 · L14 6 · L15 2.

Evidence classes stay separate.

Formal record, parent-reported formal content, parent observation, visual candidate, administrative permission, and inference remain distinct labels.

Review evidence tiers →

CLINICAL USE

A new change deserves the test that can answer it.

Define the person’s own baseline, preserve timing and recovery, then distinguish neurologic, sleep, pain, gastrointestinal, immune, endocrine, cardiac, autonomic, medication, and environmental explanations.